- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S865.g12456.03.t
Possible name(s)
CRIM1; FRAS1; SPON1
Gene model
Location
S865 [20,697 / 26,637]
Amino acid sequence
Length: 270
>Phmamm.CG.MTP2014.S865.g12456.03.p
MCEQGLLADDNQVTWHNEDCHTCRCQGATAICQQETCPSLDCQHPVSVENKCCPMCPDQV
CKAADGRFFAEGADWHLDDCTFCECKQGRVLCSIEDCEFKSCKTPHKVPGRCCPVCPDTS
CYENNGMNHTAGTVWKEDAIECVVSTWGDWGECPIQECGGGMRRRYRSVVIPPRNGGAFC
PHMSEAQLCPRTPCNDIPVCPVTKWSTWSHCTATCGNGRRIRMRREAKVTKATMTSLIDC
SQTHMQESMRCYTGTCNIAPRSMISSECLS
Nucleotide sequence
Length: 813
>Phmamm.CG.MTP2014.S865.g12456.03.t
ATGTGTGAACAAGGATTACTTGCCGATGACAACCAAGTGACATGGCACAACGAGGACTGC
CACACTTGCCGCTGCCAAGGTGCCACTGCCATCTGTCAGCAGGAGACCTGTCCAAGTTTA
GACTGCCAGCATCCTGTGTCAGTTGAAAACAAATGCTGCCCAATGTGTCCAGACCAAGTT
TGCAAAGCAGCCGATGGTCGTTTCTTTGCGGAAGGCGCTGATTGGCATTTAGACGACTGC
ACATTTTGTGAATGCAAACAGGGCAGGGTTCTATGTTCCATCGAAGACTGTGAATTCAAA
TCCTGCAAAACACCCCACAAAGTTCCTGGCCGATGTTGCCCTGTATGTCCTGATACATCT
TGTTATGAAAACAACGGAATGAACCACACAGCTGGAACTGTGTGGAAGGAAGATGCGATC
GAATGTGTTGTGTCGACTTGGGGTGACTGGGGTGAATGTCCCATACAAGAATGTGGGGGC
GGAATGAGAAGAAGATACAGAAGTGTGGTGATTCCCCCCAGAAACGGGGGTGCTTTCTGT
CCCCATATGAGTGAGGCGCAGCTTTGTCCTAGAACTCCGTGCAATGATATCCCAGTTTGT
CCTGTCACCAAATGGAGTACATGGAGCCACTGTACCGCCACTTGCGGTAACGGACGTCGT
ATCCGAATGCGCAGAGAAGCCAAGGTCACCAAAGCCACCATGACATCACTGATCGATTGT
TCACAAACTCACATGCAAGAAAGCATGAGATGCTACACCGGAACGTGCAACATTGCTCCT
CGCTCTATGATATCAAGTGAGTGTTTGTCCTAA
| ProSiteProfiles |
VWF_dom (IPR001007) - T[1-57] 9.006 - T[59-117] 10.572 |
| SMART |
VWF_dom (IPR001007) - T[2-56] 5.7E-5 - T[61-116] 1.3E-6 |
| Pfam |
VWF_dom (IPR001007) - T[7-56] 8.0E-7 - T[64-116] 2.9E-9 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[20-56] . - T[80-116] . |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[140-189] 1.0E-13 - T[198-256] 2.4E-8 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[140-189] 8.76E-10 - T[200-256] 2.75E-7 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[141-195] 10.462 - T[199-257] 9.326 |
| SMART |
TSP1_rpt (IPR000884) - T[144-195] 1.0E-9 - T[202-257] 1.4E-4 |
| Pfam |
TSP1_rpt (IPR000884) - T[145-194] 2.3E-7 - T[204-228] 2.7E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CRIM1_HUMAN | 38.182 % | 77.4 | 5.51E-16 |