Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S867.g12467.01.t

Possible name(s)

NLRC3; NLRP12; NLRP5

Gene model

Phmamm.CG.MTP2014.S867.g12467

Location

S867 [192 / 2,744]

Sequences

Amino acid sequence

Length: 280

>Phmamm.CG.MTP2014.S867.g12467.01.p
MQLSVYLKKLDLSFNKIGDSGTTSLARCVHNIEELELGGCEAESQGADELSLKIEVLEKP
LKKLDLSYNKIGDPGAASLGRSIHNTKRLILKDCEIKTKGVEDLSVKIKALKSPMTQLDL
SHNKIGDLEATSLALCIHNFEELVLIGCEIGQKGTELLSVEIKTLRRPLRKLDLSENKIG
DQGATSLSQGVHNIEELLLRGCEIRSKGMIPLSQKMRTLQVPMKKLDLSRNMICDLGATL
LSHCISHIEELELDGCEIGNKGVKEIAKRIQSLHQPVRLF

Nucleotide sequence

Length: 843

>Phmamm.CG.MTP2014.S867.g12467.01.t
ATGCAACTAAGCGTTTATCTGAAGAAACTCGATCTCTCCTTTAACAAGATTGGAGATTCG
GGCACAACTTCTCTTGCTCGTTGCGTCCACAACATCGAAGAGCTTGAGTTGGGAGGTTGT
GAAGCCGAAAGTCAAGGCGCAGACGAGCTTTCCTTGAAGATTGAAGTCTTGGAAAAGCCC
CTGAAGAAGCTCGACCTCTCTTACAACAAGATTGGTGATCCAGGAGCAGCTTCTTTGGGT
CGCAGCATCCACAACACCAAACGGCTGATCCTAAAGGACTGTGAGATCAAGACTAAGGGC
GTGGAAGATCTTTCTGTTAAAATCAAAGCCTTGAAAAGTCCGATGACACAGTTGGATCTT
TCGCACAACAAGATTGGCGACTTGGAAGCAACTTCGCTTGCTCTTTGCATCCATAACTTT
GAAGAGCTTGTTCTGATTGGATGCGAGATCGGACAGAAGGGTACCGAACTACTTTCTGTC
GAAATCAAGACGTTACGACGACCTTTAAGGAAACTAGATCTCTCGGAAAACAAGATTGGA
GATCAAGGCGCGACCTCACTGTCACAAGGTGTCCACAACATCGAAGAGCTGCTGCTTCGT
GGATGCGAAATCCGGAGCAAAGGAATGATACCTCTCTCGCAGAAGATGCGAACATTGCAA
GTCCCAATGAAGAAACTTGATCTTTCCCGAAACATGATCTGTGACTTGGGGGCAACATTG
CTCTCTCACTGCATTTCTCACATAGAGGAGCTGGAGTTGGACGGATGTGAGATTGGCAAC
AAGGGAGTGAAGGAGATTGCCAAAAGGATTCAGTCCCTTCATCAGCCGGTACGATTATTT
TAA

InterProScan

Gene3D	LRR_dom_sf (IPR032675) - T[2-87] 4.5E-14 - T[88-278] 6.3E-36
Pfam	Leu-rich_rpt (IPR001611) - T[6-26] 2.6E-4 - T[61-79] 7.9E-5 - T[115-127] 0.048 - T[169-188] 1.0E-4 - T[223-242] 0.61 - T[246-267] 0.0048

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value