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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C12.568.v1...' > 
  2. Transcript 'Cisavi.CG.ENS81.R27....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S868.g12478.01.t

Possible name(s)

PSMG1

Gene model

Phmamm.CG.MTP2014.S868.g12478

Location

S868 [9,243 / 15,854]

Sequences

Amino acid sequence

Length: 251

>Phmamm.CG.MTP2014.S868.g12478.01.p
MAAFFGEVLPVISRAVEDEESDDEFINPEFIWKPSDDSGSKQFSPNWLVMAVGAVPAGFL
QCHMELTNSLGNIVEINDSKEKTIIGFYSSTCGKVIYCISSTYILPDKLWCLIQKVFEVV
HCGENTRVCLLDADTVYNYHTHSIAKLSLPFLRHLKTSKHPDVPDIDALSQPNMAKGLTA
AVMSYCQLNKIAAALYICYTETVLPDAATLLAFSKLTGEEPFKTSKVPKEESLSRIKLYL
QSPANNQTLYI

Nucleotide sequence

Length: 2,068

>Phmamm.CG.MTP2014.S868.g12478.01.t
TACCGGTTACAAATTTTAAGAATAAAATTACGCAAATGATATACAGAATACACAGTTTAC
ATAAAAGCAGTAGTTTGGTTAATTATATTTTGTTACTATAACATTTTTGTACCAAATAAC
AAAATATATTTCATGTGCATGCTCCGTTAAAATAAATCGGGTAATTCCCGTTTGGTGAAA
TCCCGCTGCACAATGACAATGCACATGTGCTGATCATAAATGTTGTTTGGGAATTGTGCT
TGACAAGTTGATACAATTTTTGATCAATGGCTGCGTTTTTCGGTGAAGTTTTGCCAGTAA
TATCTCGTGCTGTGGAGGACGAGGAAAGTGACGATGAATTCATAAATCCTGAATTTATAT
GGAAACCATCTGATGATTCTGGATCTAAACAGTTTTCACCAAACTGGCTGGTAATGGCTG
TAGGCGCAGTTCCTGCAGGTTTTTTACAGTGTCATATGGAATTAACGAACTCATTAGGAA
ACATAGTAGAAATTAATGATTCTAAAGAAAAAACAATCATTGGTTTTTACTCAAGCACAT
GTGGCAAAGTGATTTACTGCATCTCATCTACATATATTCTGCCGGACAAGCTATGGTGCC
TGATTCAAAAGGTTTTTGAAGTTGTACATTGTGGTGAGAACACAAGGGTATGCTTGCTGG
ATGCAGACACTGTTTACAATTACCATACACATTCAATTGCCAAACTGTCTTTGCCATTTT
TGCGCCACTTGAAAACTTCCAAGCACCCTGATGTACCTGACATAGATGCACTTTCACAAC
CCAACATGGCTAAAGGATTAACTGCAGCAGTGATGTCGTACTGCCAGCTCAACAAGATTG
CAGCAGCTTTGTACATCTGCTACACTGAAACAGTTCTACCAGATGCTGCCACACTTCTTG
CTTTTAGTAAACTAACTGGCGAAGAACCATTCAAGACCAGCAAAGTGCCTAAAGAGGAAT
CACTGTCAAGAATCAAGCTGTATCTTCAATCACCAGCAAACAACCAAACTCTGTACATAT
AAAACACAGCAAATATATCAAAGAAATGGAGTTTATTTGCCCTAACGCACTTCTGGGCAG
GAATCGATCTACACAACCCAAATGAAAGCAGCATTTCAAGTCATAAGACTATTTTTTCCA
AGTTCAGGGTCAAGTGAAGTTCAAAGTTCACTTGAAATTCCATGAAATCAAAGAAGTCCT
TGTCTCTGAAGATCATCAAATGTTTTCTTTGTCACTACATTACCAGCAGAGTCCTCAAAT
TCTTCTTCATGCTCTGGGTTCCATCGTTCAGAGTTCTTAGTTTGTTTTATTTTGGTCCAC
ACTAAAATATTGGTGTTGTATATGTTAGAAACGAATCACATACCAATAGTGAGGTTAAGC
TTTTATCTTTACAAATAAACAAACAATGACTCAGAATTGGACACTGTCAGACAAAAACTA
TGATGTCATGGTGTAGCACTGATTTTGTATGTGCTGGTATTTAGAATAAGAGACTTCTAT
TCTATGTGTATAGCCAAAAGAAGAAGCAGGAGTTGTTAGCTGCTCCAGAGCGTTGCAGGC
AGATTACAGGTTATAACTTTTTGCCAAGTGAAATATAACTAATAATTCAGCAGTTGCGAA
CAAATCACTTTAGGACTTACTAACCATATGTATTTTTAGAATTATGGCATAAATACAGCC
TACGCCTTCAAATAATATGTTGATTTCAATGACTTGCTTGAACATTAGATGCATAATAAC
AAGTTATTCACTGGTGTGGCATGTGGGGTAAAATGAAAATATCTGAAAATTAGGACTTAC
AGGCAAGTGCATCCTCAATTTGAGTGACATTGGCAAAGTGAGCAGTGTTCGGAATTCCAA
GACATCTCATTCCATGGGCATGTCTCCATTCCTATAAACAGGAAAGCCACATAGAATTTG
TACTTGTAATCGCACTGTGTTATCCCTCAGTTATAAAAAAGTACATTTGTTAAAGTAATT
ATTCGATTATATTTGTTGATTTGATTAAAATTTAAAAACACATTGATTTTAGAAACAAAA
AGTCGCATACTGAAAAATGTCTCTGAAA

InterProScan

PANTHER
Proteasome_assmbl_chp_1 (IPR016565) - T[1-251] 2.1E-42
Pfam
Proteasome_assmbl_chp_1 (IPR016565) - T[1-250] 6.2E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSMG1_HUMAN 36.923 % 74.7 9.04E-16