- Transcript 'Cisavi.CG.ENS81.R22....' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S86.g02842.01.t
Possible name(s)
LDLRAD3; RXFP2; TSHR
Gene model
Location
S86 [29,446 / 33,928]
Amino acid sequence
Length: 317
>Phmamm.CG.MTP2014.S86.g02842.01.p
TSSLCHPGQVRCENDNFTKCINRSSVCDGVVDCATNLDEKCSKVDCSKQNPKKTVTGVLC
DGIEDCVPFIPGLARWVNPPGFPADECKAECPKKVGSFNCTDDLIHGVSNPPNVFTCLKP
IKLGNLLVNITVRLPGKHECDGIVDCPVDKIDEMDCPDRFPCTSGVLVSIPSSKVCNGYK
DCDDASDESKEICPDRFYCSSRQGLKIVIIGEIKALKKIFDKDRAASLRTNHMLVLNLAV
ADFLMSIYLFMLGIAGIVYSGTYCSKSLEWLSSQSCVVMGVLVVISSETSVSTMLLLTLS
RLYAVSKVNSNTYYIVV
Nucleotide sequence
Length: 954
>Phmamm.CG.MTP2014.S86.g02842.01.t
ACATCTTCTCTCTGTCACCCGGGACAAGTTCGCTGTGAAAACGACAACTTTACCAAATGC
ATCAACCGCAGTTCTGTGTGCGACGGAGTTGTGGACTGTGCTACTAACTTAGACGAAAAA
TGCAGTAAGGTGGATTGCTCAAAACAGAATCCAAAGAAAACCGTTACTGGTGTTTTGTGC
GACGGAATCGAAGATTGTGTACCTTTCATACCTGGATTGGCCAGATGGGTAAATCCACCT
GGTTTTCCTGCAGATGAGTGCAAAGCTGAATGCCCAAAGAAAGTTGGAAGCTTTAATTGC
ACTGATGATTTGATCCATGGTGTTTCAAATCCGCCAAATGTATTTACCTGCCTAAAACCA
ATAAAATTGGGCAATCTGCTGGTCAACATAACGGTGCGCTTACCTGGTAAACACGAGTGC
GACGGAATCGTGGATTGCCCTGTGGACAAGATTGATGAAATGGATTGTCCAGATAGATTC
CCATGCACAAGTGGCGTCTTAGTGAGTATTCCTTCATCTAAAGTATGCAATGGGTATAAA
GACTGTGACGATGCAAGTGATGAGAGCAAAGAGATTTGTCCGGATAGATTTTACTGCTCT
TCGCGCCAGGGTTTGAAGATAGTCATCATTGGCGAAATCAAAGCTCTGAAGAAGATTTTC
GACAAGGACCGTGCTGCATCACTGCGCACCAATCACATGTTGGTGTTAAATCTAGCTGTT
GCCGATTTTCTAATGTCAATTTACCTGTTCATGTTGGGAATAGCAGGAATAGTTTACAGT
GGAACTTATTGCTCCAAGTCTCTAGAATGGCTGAGTAGCCAATCGTGTGTTGTCATGGGA
GTATTGGTTGTCATATCAAGCGAAACCTCAGTGTCTACCATGTTGTTGTTAACTCTTAGC
CGTCTATACGCAGTATCTAAGGTAAATTCAAATACCTATTACATTGTAGTATAG
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[4-40] 3.27E-6 - T[158-188] 2.23E-6 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[4-43] 9.0E-6 - T[155-195] 2.2E-6 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[4-42] 10.8 - T[155-194] 9.975 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[5-40] 6.74439E-5 - T[157-188] 1.52553E-4 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[18-39] 7.6E-8 - T[131-152] 7.6E-8 - T[167-188] 7.6E-8 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[157-191] 9.9E-8 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[211-317] 11.645 |
| PANTHER |
TSHR/LHCGR/FSHR (IPR034298) - T[221-306] 4.2E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|