- Clone 'ma317j15' >
- Molecular Tool 'Mitf>Stable b-catenin' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S871.g12503.01.t
Possible name(s)
DHX58; FANCM; IFIH1
Gene model
Location
S871 [27,566 / 34,312]
Amino acid sequence
Length: 1,038
>Phmamm.CG.MTP2014.S871.g12503.01.p
EVRSEDSIDIQQYTHSRKVDKIVVKLDQKILDIKEKYMNVIEVFINNLVSNKALYNKDVS
YLSKYAMLMSRDQFRKDPPSGLSRQTMGIIEGDFAITISLYHGLELLLQHGMKSFFIFLK
GIVEGSKGNMRSKTILQSNKTFISIYNELTKLYGDAPGSVVMFTQASSSQSKRLKDQQEQ
TSNSLYVYGHPKMKKLEEVVVNHFETFNKSDTETRVMVFCQYRDSVREITELLQTHRPLI
RPMQFVGHAPSTNPTGDTPSNKNKRFTQKDQLMVVSKFRSGGYNTLVSTCVGEEGLDIGD
VDLIVCFDSHKSPIRLVQRMGRTGRKRAGRIVMLVTEGKEERDYNSSVASRKSIHKAITG
AGKNLHYYPHNPRMLPKGLHPTCHKMFITVAKKPTAEKKVKTKPNKSADVSVMLKKVVQQ
SHDKSLLTETQQETWKAKCQLTVHEKVATKKLPKFGEMVSLDKKLFQLKCQNNNLSLSEW
LPWQHRLQPTMFVGHSSRSELLTEVLNVCDQMKNDDSHENLLQTSVSIKNTQKEKRLKTR
KTSLNKIDKQKPQLELESLTTTTQDDILILSDDQENTEGNEVPDKAIKECISNPPAMDIL
ENTQNQFDDPAGDTKFNEFVTPKAIGSKRVLDQGKSFSFSENLSAIFPTPLPCKPDKIES
RHSSEIKIPSPPHMDSLAFDFLDDIDADNGSDNDHHTKHNQRSCFQIWDSDVTQQNSKHN
EKSNAESTELKKIETIVKHDETNLQHCAGEENETKNKTDASSQKKSASFEECVKVYDGIS
LNNNDSTTEPVHDERGCSDSDTQNDNVNTELLASANTANTQSLQEPPYQSECIANKNQQI
GGTELPCNKKNVIDKTHLKNVLTSSMPGGESFNMSADMFHPQFDLNFDLECESFIEERNA
NHQKDTVLKCANPDKKEFSKESKPRSTENNVETELPCTSVDLSQYKRKKNQKLFADLSVS
SDHTVPVAAVKPQRLSPDKSDIRKDTSLPPPEVFQQKRVAKSLKRQRSPTLVKSSDEGSE
SDDFVCSRKKRCLNVSKS
Nucleotide sequence
Length: 3,116
>Phmamm.CG.MTP2014.S871.g12503.01.t
TGAAGTACGAAGTGAAGATTCTATTGATATCCAGCAGTACACTCATTCAAGAAAAGTTGA
CAAAATTGTTGTCAAACTGGACCAAAAAATACTTGACATCAAAGAAAAGTACATGAATGT
AATAGAGGTTTTTATCAACAATCTTGTCAGTAACAAAGCTTTGTACAACAAAGATGTTTC
CTATCTTTCCAAGTATGCCATGTTAATGTCCAGAGACCAGTTTCGAAAGGATCCACCATC
TGGATTATCGAGACAAACTATGGGCATCATAGAGGGTGACTTTGCCATTACAATAAGTTT
GTACCATGGTTTGGAACTATTGTTGCAGCATGGCATGAAGTCCTTTTTCATATTTTTAAA
GGGTATTGTGGAAGGATCAAAAGGCAACATGCGCTCAAAAACAATTCTGCAATCAAATAA
AACATTTATTTCCATCTACAATGAACTAACTAAACTATATGGGGATGCACCTGGCTCAGT
GGTGATGTTTACTCAAGCCAGCTCCAGTCAGTCAAAACGATTAAAAGATCAGCAGGAACA
GACCAGTAATTCCCTTTATGTCTATGGTCACCCGAAGATGAAAAAATTAGAAGAGGTGGT
TGTCAACCATTTTGAAACATTTAACAAATCAGACACTGAAACTCGTGTAATGGTGTTTTG
CCAATACCGTGACAGTGTCAGGGAGATAACAGAACTCCTGCAAACTCATCGACCCCTGAT
TCGACCAATGCAGTTTGTGGGTCACGCTCCTTCCACCAATCCTACTGGTGACACACCATC
AAACAAAAACAAGCGATTCACACAAAAGGATCAACTTATGGTGGTGAGCAAGTTTCGGTC
AGGTGGTTACAACACACTTGTGTCAACCTGTGTTGGTGAAGAAGGTCTTGATATTGGGGA
TGTTGATCTTATTGTGTGCTTTGATTCACACAAAAGTCCCATTCGCCTTGTTCAGCGCAT
GGGTAGAACAGGCCGCAAGCGAGCTGGTAGAATTGTGATGCTTGTCACCGAGGGAAAAGA
AGAAAGGGACTACAATTCAAGTGTAGCTAGTCGAAAAAGCATCCACAAAGCAATAACAGG
AGCAGGAAAAAATCTACATTACTATCCACACAATCCCAGAATGTTGCCCAAAGGTTTGCA
TCCTACATGTCACAAAATGTTTATCACTGTTGCTAAGAAGCCAACAGCTGAGAAAAAAGT
AAAGACCAAACCAAACAAATCAGCTGATGTGTCTGTAATGTTAAAGAAAGTTGTGCAGCA
GTCACATGATAAATCGTTACTAACGGAAACACAGCAAGAAACTTGGAAAGCTAAATGTCA
GCTAACTGTGCATGAAAAAGTTGCTACCAAAAAGCTTCCCAAATTTGGCGAGATGGTCAG
TCTGGATAAGAAGTTGTTTCAACTAAAGTGTCAAAACAACAATCTTTCCCTAAGTGAATG
GTTACCTTGGCAACATCGACTACAGCCGACTATGTTTGTTGGCCATTCATCTCGCAGTGA
ACTTTTAACAGAGGTGCTGAATGTATGCGATCAAATGAAAAATGATGATAGCCATGAAAA
TTTACTTCAAACATCAGTTTCAATCAAAAATACACAGAAAGAAAAACGTTTGAAAACAAG
AAAAACATCATTGAACAAAATAGACAAACAGAAACCTCAACTTGAACTTGAAAGTTTGAC
TACAACGACACAAGATGATATTCTCATATTGTCTGATGACCAAGAAAACACAGAAGGGAA
TGAGGTACCAGACAAAGCAATCAAAGAATGTATATCCAATCCACCAGCAATGGACATATT
AGAAAACACACAAAATCAATTTGATGACCCTGCTGGTGATACTAAATTCAATGAGTTTGT
TACACCCAAAGCAATTGGCAGTAAAAGGGTGCTTGATCAAGGAAAAAGTTTTTCATTTTC
TGAAAATCTGTCAGCCATCTTTCCAACACCATTACCTTGCAAACCTGATAAAATAGAATC
AAGACATAGCAGTGAAATTAAGATTCCTTCACCTCCACATATGGATTCCTTAGCTTTTGA
CTTTCTTGATGATATTGATGCAGATAATGGTAGTGATAATGATCATCATACTAAGCACAA
TCAGCGGTCTTGTTTTCAAATTTGGGATTCAGATGTAACTCAGCAAAACAGTAAACACAA
TGAGAAATCCAATGCAGAATCTACTGAACTTAAAAAAATTGAAACAATAGTAAAACATGA
TGAAACAAATCTGCAACATTGTGCTGGAGAAGAAAATGAAACAAAAAACAAAACAGATGC
CAGTTCCCAGAAGAAGTCTGCTTCTTTTGAAGAATGTGTCAAAGTTTATGATGGCATTAG
TTTAAATAACAATGATAGTACAACAGAGCCTGTTCATGATGAAAGAGGCTGCAGTGACAG
TGATACTCAGAATGACAATGTGAATACAGAATTGCTTGCTTCTGCTAATACTGCCAATAC
ACAAAGTTTGCAAGAACCACCTTACCAAAGTGAGTGCATTGCAAATAAAAATCAGCAGAT
TGGTGGTACTGAACTCCCATGCAATAAGAAAAATGTCATTGATAAAACTCATTTGAAAAA
TGTATTAACTTCATCCATGCCAGGAGGTGAATCATTTAACATGTCAGCTGATATGTTTCA
CCCCCAATTCGATCTGAATTTCGATTTGGAATGTGAAAGCTTCATTGAAGAACGTAATGC
CAACCATCAAAAGGATACAGTCTTAAAATGTGCCAATCCTGACAAGAAGGAATTCAGTAA
AGAGTCTAAACCAAGATCTACTGAAAACAATGTGGAAACAGAACTTCCCTGCACCAGTGT
GGATTTAAGTCAATACAAGCGCAAAAAGAACCAGAAACTCTTTGCAGATCTGTCAGTGTC
CAGTGATCACACAGTGCCAGTGGCAGCCGTCAAACCCCAGCGATTATCACCAGACAAAAG
TGACATAAGAAAAGATACAAGCCTGCCTCCACCAGAAGTGTTTCAACAAAAAAGAGTTGC
TAAAAGCCTTAAAAGGCAAAGAAGCCCAACTCTAGTGAAATCAAGCGATGAGGGTTCTGA
AAGTGATGACTTTGTTTGTTCCAGGAAAAAAAGATGCCTTAATGTTTCAAAATCTA
| CDD |
Helicase_C (IPR001650) - T[183-334] 6.30004E-21 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[183-363] 3.65E-29 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[195-373] 16.713 |
| Pfam |
Helicase_C (IPR001650) - T[208-326] 5.1E-17 |
| SMART |
Helicase_C (IPR001650) - T[227-327] 2.9E-17 |
| Pfam |
FANCM-MHF-bd (IPR031879) - T[423-519] 4.2E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FANCM_HUMAN | 44.402 % | 439 | 1.99E-131 |