Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S875.g12523.01.t

Possible name(s)

OMA1; SPAG7

Gene model

Phmamm.CG.MTP2014.S875.g12523

Location

S875 [32,747 / 40,421]

Sequences

Amino acid sequence

Length: 460

>Phmamm.CG.MTP2014.S875.g12523.01.p
MSNHRKHLVNNAFVLPSGEIFVFTGILKLLDSWEELAVIIGHEMSHALLGHVQEQQSFLA
FGEILMVPVLSFIWFLFEDFAAFIVYSIQQLIYPLIFEVGFNLPFSRKLEVEADEVGLTL
AAKACYDPRWSVLLWDKMALKEACDQFSGETVGEMEYISTHPSHERRAYLLEEKLPDATI
TRIKCKCPELSKTENPLEKAHSLRKLTVNIRERVKIRTEIVSLEKKLAEHSSTEEEQTLK
HLKLKHQKLEKEFEGMTLKNVEQKVTDKQNILDSWMRNFKGFFKTSSFKSFPSLGNETEL
TSVLGQCKSPATNISLIKHEIAEIAGITSQAFGVEDNDRYVMLFKKEDPPTEDEINAYKH
GEEWNKETQEKVKQQKIVEVEESKHTKSNDVSEPMSNYKDKYNHLIGTSAAKDAARRTEA
NKTFGMVPSTNKRDQRSIEETLNQIRAKKRQKVSDEEPSS

Nucleotide sequence

Length: 1,383

>Phmamm.CG.MTP2014.S875.g12523.01.t
ATGTCAAACCATCGTAAACACCTTGTGAACAATGCTTTTGTTTTGCCAAGTGGTGAGATA
TTCGTGTTCACTGGAATTTTAAAGTTGCTGGACAGTTGGGAGGAATTGGCTGTTATCATC
GGCCATGAGATGTCCCATGCTCTGCTTGGCCATGTACAGGAGCAACAAAGCTTCCTTGCT
TTCGGGGAAATCCTGATGGTTCCCGTTCTATCATTTATCTGGTTTTTGTTCGAGGACTTT
GCAGCTTTCATCGTTTATTCGATTCAACAATTAATTTATCCTCTTATATTTGAGGTTGGG
TTCAATTTGCCGTTTAGCAGAAAACTTGAAGTGGAGGCTGACGAAGTCGGTTTAACGCTC
GCAGCAAAAGCTTGTTACGATCCGAGGTGGAGCGTTCTGCTGTGGGACAAAATGGCTTTG
AAGGAAGCTTGTGACCAATTTTCTGGAGAAACTGTTGGCGAAATGGAATATATTTCAACG
CATCCGAGCCATGAGAGGAGAGCTTATCTTCTGGAGGAAAAACTTCCAGATGCAACGATA
ACAAGGATCAAATGCAAATGCCCCGAACTTTCCAAAACTGAAAACCCACTTGAGAAGGCT
CACAGTCTGAGAAAACTCACAGTTAATATCAGAGAGCGAGTCAAAATTCGAACAGAAATA
GTTTCCTTGGAAAAGAAATTAGCCGAGCATTCAAGCACTGAAGAGGAACAAACTTTGAAA
CATCTCAAGTTAAAACACCAAAAACTCGAAAAAGAATTTGAGGGGATGACTTTGAAAAAT
GTGGAGCAGAAAGTCACGGACAAACAAAACATTTTGGATTCGTGGATGAGAAACTTTAAG
GGATTCTTCAAAACCAGCTCGTTTAAATCTTTTCCAAGTTTAGGAAATGAAACTGAATTG
ACATCTGTGCTGGGACAATGCAAAAGTCCTGCAACTAATATAAGTTTAATTAAACACGAG
ATAGCTGAAATAGCAGGCATCACTTCACAAGCGTTCGGAGTAGAAGATAATGACAGATAT
GTGATGTTGTTTAAAAAAGAAGACCCACCAACTGAAGATGAAATAAATGCTTACAAACAC
GGGGAGGAATGGAATAAAGAAACGCAGGAAAAAGTCAAACAACAAAAAATTGTTGAGGTT
GAGGAAAGCAAACATACAAAGTCCAACGACGTCAGTGAGCCAATGTCAAACTACAAGGAC
AAATACAACCACCTGATTGGAACCTCGGCAGCTAAAGACGCAGCACGACGAACAGAAGCA
AACAAAACTTTTGGAATGGTTCCGAGCACAAACAAGCGCGACCAGAGATCCATCGAAGAA
ACTTTAAACCAAATCCGTGCCAAAAAGCGTCAAAAAGTTTCAGATGAAGAGCCATCGTCA
TGA

InterProScan

Pfam	Peptidase_M48 (IPR001915) - T[8-172] 8.1E-27
Gene3D	R3H_dom_sf (IPR036867) - T[312-367] 2.5E-14
PANTHER	SPAG7 (IPR017330) - T[317-457] 5.3E-58
SUPERFAMILY	R3H_dom_sf (IPR036867) - T[318-370] 9.42E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SPAG7_HUMAN	50.676 %	146	2.68E-41
OMA1_HUMAN	40.642 %	135	1.52E-34