- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S877.g12538.02.t
Possible name(s)
CTDP1; CTDSPL2
Gene model
Location
S877 [35,677 / 44,633]
Amino acid sequence
Length: 530
>Phmamm.CG.MTP2014.S877.g12538.02.p
GDSMVCIIDDRDDVWNAIPNLILVKKYSYFPGAGDINSPDKAEKNKSGKQQKKNGTANND
PTNSKVSPRKRKSDEENLDEEVTSSKLPKTSNEAEDKSDVSQKEKSGNCDESEQMTHEEA
TVKTSDVDKNSDKSSQVISEEEHKEDITSHPKEQCQITENMNDEPNTDNEILSNKGQKTD
TGVNAENDAKANHTEKIENEGSVKEITVCEDKKDNGVYQTGDAKCEAKLPSPECSSLGSK
MLKEDTDDYLLYLQAVLTVIHKTYYDAYTKYKEGEFEHPPDLRGVVPFLRSRVLFGCNLV
FTGVIPNNFKGLPHQHRAYIVAKQLGATVDAKVSESTTHLVGGKKGTAKYQECLKMGKDK
VKFVSLDWLWSCSERWEKVNEKLFPIPKGSTSNHPSREGTPPVTQAAGKASSVSETSSTK
TYNAFTGKLVKKVQDARFDFMVSEAVTRNVQHKRMTPIYSSLIDPEVAVPMVAQVQESKK
SSNTPTSKQEDDNSSTSKAAGRTRKPSMAEVMGIGYSLSTNDIEDMDKEV
Nucleotide sequence
Length: 1,590
>Phmamm.CG.MTP2014.S877.g12538.02.t
GGTGATTCGATGGTTTGTATCATTGATGATAGAGATGATGTTTGGAATGCCATACCAAAT
CTAATTCTTGTGAAGAAATACTCCTACTTCCCTGGTGCTGGTGATATAAACAGCCCAGAT
AAAGCAGAAAAAAACAAAAGTGGAAAGCAACAGAAAAAGAATGGAACAGCCAACAATGAT
CCCACAAATAGTAAAGTTTCGCCACGAAAGAGGAAATCTGATGAAGAAAACCTTGATGAA
GAAGTGACATCATCAAAACTTCCAAAGACTTCGAATGAGGCAGAAGATAAGTCAGATGTT
TCTCAGAAAGAAAAGTCTGGAAATTGTGATGAATCTGAGCAAATGACACATGAAGAGGCT
ACAGTGAAAACTTCTGATGTTGATAAAAACAGTGATAAATCATCACAAGTAATTTCTGAA
GAGGAACACAAAGAAGATATCACTTCTCACCCAAAAGAACAGTGTCAAATAACAGAAAAT
ATGAATGATGAACCAAACACAGACAATGAAATATTATCTAATAAGGGCCAAAAGACAGAC
ACTGGGGTTAATGCAGAAAATGATGCAAAAGCAAATCATACAGAAAAAATTGAAAACGAA
GGTTCTGTAAAAGAAATAACTGTCTGTGAAGACAAAAAGGACAATGGTGTATATCAAACT
GGAGATGCAAAATGTGAAGCTAAGCTTCCCTCTCCAGAATGCTCCTCATTAGGAAGCAAA
ATGCTCAAAGAGGATACAGATGATTACTTGTTGTACCTCCAGGCAGTGCTTACAGTTATA
CACAAAACATACTATGATGCATACACTAAGTACAAAGAAGGTGAATTTGAACATCCACCA
GATTTGAGGGGTGTTGTACCATTTCTAAGAAGCAGGGTTTTATTTGGTTGCAACCTCGTA
TTTACTGGTGTCATACCAAACAACTTTAAGGGACTTCCCCATCAGCATCGAGCATATATT
GTCGCTAAGCAACTTGGTGCTACTGTAGACGCAAAGGTTAGTGAGAGCACAACTCATCTG
GTCGGAGGCAAGAAAGGCACAGCAAAATATCAGGAGTGCCTAAAAATGGGAAAAGATAAA
GTTAAATTTGTGTCACTCGATTGGCTGTGGTCATGTTCTGAAAGGTGGGAGAAAGTGAAT
GAAAAATTGTTTCCAATTCCTAAAGGCTCTACCAGTAACCATCCAAGTAGGGAAGGAACA
CCTCCTGTCACTCAAGCTGCAGGAAAGGCATCTTCAGTCTCTGAAACATCAAGTACTAAA
ACTTACAACGCCTTCACTGGAAAACTAGTGAAAAAAGTTCAAGATGCTCGTTTTGACTTT
ATGGTATCAGAAGCAGTGACCAGAAATGTGCAACATAAACGGATGACCCCGATATACTCT
TCATTAATAGATCCTGAAGTGGCAGTACCGATGGTGGCACAAGTTCAAGAATCAAAAAAA
TCCTCAAATACTCCAACCTCAAAACAAGAAGATGATAATTCTTCCACTTCCAAAGCTGCA
GGGCGAACGAGGAAACCAAGTATGGCTGAAGTAATGGGGATTGGATACTCACTTTCAACT
AATGATATTGAGGACATGGACAAAGAGGTT
| SUPERFAMILY |
BRCT_dom_sf (IPR036420) - T[246-387] 2.04E-15 |
| ProSiteProfiles |
BRCT_dom (IPR001357) - T[289-386] 13.757 |
| SMART |
BRCT_dom (IPR001357) - T[291-376] 5.6E-4 |
| Gene3D |
BRCT_dom_sf (IPR036420) - T[293-386] 2.1E-21 |
| Pfam |
BRCT_dom (IPR001357) - T[296-372] 8.1E-5 |
| CDD |
BRCT_dom (IPR001357) - T[296-372] 3.0574E-6 |
| Pfam |
FCP1_C (IPR015388) - T[374-530] 4.0E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTDP1_HUMAN | 31.773 % | 130 | 4.79E-32 |