- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Clone 'cign064g21' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S88.g02892.01.t
Possible name(s)
NLE1; TAF5; WDR55
Gene model
Location
S88 [14,480 / 19,724]
Amino acid sequence
Length: 374
>Phmamm.CG.MTP2014.S88.g02892.01.p
MSDSEDESGDETKTQVERPKAITGHSDFVDISFHPLEFYALATANLNGYVTVHKCNPGED
SERKFKIRASTKPCRCLSFSSTGDDVFVLTKDRTLQTINTCTGKVASKFTDIHSSPPYSL
AIIDKNLLATGDDGGTLKALKYQTKPVVLKLCVATPCGDGTMATFNARQRKFIVQSENEE
CDILCAKVVKDNKKVIAGLADGLMLLYNWDEFAAPSDKFPGHTDSIDHIAKVTEDIVCTA
SSDGKIRAVHILPNRFLGVVGDHDGMPVEKVKCTTDGRFLASCSHDSTVRFWSVEHLHET
DVDPQGKPEKHKKNEKMSQSGVGHGRKEFFADFEKDVVVPSADEDSDSDLGSDLPDSDEL
SDSESSIDGESEPE
Nucleotide sequence
Length: 1,125
>Phmamm.CG.MTP2014.S88.g02892.01.t
ATGAGCGACTCAGAAGATGAAAGCGGTGATGAAACTAAGACACAAGTGGAGAGACCGAAA
GCTATTACCGGGCATTCCGACTTTGTGGATATTTCATTCCATCCGTTGGAATTTTATGCA
TTAGCTACAGCAAACCTAAACGGATACGTAACAGTACATAAATGTAATCCAGGAGAAGAT
TCAGAAAGAAAATTTAAGATAAGAGCATCAACTAAGCCTTGCCGATGTTTATCATTTTCC
TCTACTGGCGATGATGTTTTTGTGCTAACAAAGGACAGGACATTGCAAACTATCAATACT
TGTACTGGAAAAGTGGCTTCAAAGTTTACTGATATTCACAGTTCACCTCCATACAGTCTT
GCAATAATTGACAAAAATTTACTGGCAACTGGAGATGATGGTGGAACGTTAAAGGCTTTG
AAATATCAGACTAAACCAGTAGTTCTCAAACTGTGTGTCGCGACGCCCTGTGGGGATGGA
ACTATGGCCACATTTAATGCCAGACAAAGAAAGTTTATCGTACAATCTGAGAATGAAGAG
TGTGATATTCTGTGTGCTAAAGTTGTCAAGGACAACAAGAAAGTTATTGCTGGTTTGGCC
GATGGTCTTATGTTGTTGTATAACTGGGATGAGTTTGCTGCACCGTCTGATAAGTTTCCA
GGTCATACAGATTCTATTGATCACATAGCAAAAGTTACTGAAGATATTGTATGTACTGCA
TCAAGTGATGGCAAAATTCGGGCGGTTCATATACTACCAAATCGTTTTCTTGGTGTGGTT
GGTGACCATGATGGAATGCCAGTTGAAAAAGTAAAGTGTACAACAGATGGACGGTTTTTG
GCAAGTTGTTCGCATGATAGCACAGTCAGGTTTTGGAGTGTTGAACATCTTCATGAAACT
GATGTGGATCCACAGGGCAAACCAGAAAAACACAAAAAGAATGAAAAAATGTCCCAGAGT
GGTGTGGGACATGGTCGCAAAGAATTTTTCGCAGACTTTGAAAAAGACGTTGTGGTACCA
TCCGCTGATGAAGACAGTGATTCAGATTTGGGCAGTGATTTGCCTGATTCGGATGAACTT
TCAGATTCAGAAAGTAGCATAGATGGTGAATCTGAACCCGAATGA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[5-148] 1.4E-12 - T[149-319] 5.9E-18 |
| SMART |
WD40_repeat (IPR001680) - T[15-54] 64.0 - T[60-99] 8.5 - T[102-141] 11.0 - T[169-208] 69.0 - T[212-250] 13.0 - T[253-293] 2.1E-4 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[30-294] 3.5E-34 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[219-302] 9.494 |
| Pfam |
WD40_repeat (IPR001680) - T[259-293] 0.0011 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR55_HUMAN | 33.739 % | 189 | 1.18E-56 |