- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S899.g12668.02.t
Possible name(s)
ZIC1; ZIC2; ZIC3
Gene model
Location
S899 [48,405 / 51,240]
Amino acid sequence
Length: 499
>Phmamm.CG.MTP2014.S899.g12668.02.p
IPQPYPAFSAISRSNIEPISHLPAGNPSAVFRQSGDASPGSAWPQHPPSNIGIPAQYKYQ
YGDLPLPWQNPSPINFNLPVNFSHNLHTGQSFFTYTAFQHPQAELHQELVCKWTKAMTGG
FDETGAYQYESKPVHLHVPGEPCNLVFHNMVELVAHVSRDHVGGPEQADHTCYWESCSRK
DKPFKAKYKLINHIRVHTGEKPFLCPYPGCGKVFARSENLKIHKRTHTGEKPFCCDFKGC
NRRFANSSDRKKHTHVHTTDKPYLCKIFGCDKSYTHPSSLRKHMKLHESQGDIVISSDLD
VQQPSEPHSPDTNNNVTQNINTSLNSYDDEKCCVTPSSQHQHIHVMESPPSSSVSSASSP
ASANACENLNLDAGHATFPYHALNDTGSHEVKFVLEQTSADSADSGAFVSPQNSWQSPGG
LPSLGNHGYFMPSTTSLANDSQYYYHPSHQPTQHVYANQLPPYNRPHPPTSITHTPEFVP
FSHTLVTASPQIVPPESVF
Nucleotide sequence
Length: 1,956
>Phmamm.CG.MTP2014.S899.g12668.02.t
TATCCCGCAACCCTACCCAGCCTTTTCCGCCATTTCTCGTTCCAACATCGAGCCGATCTC
GCATCTTCCCGCGGGAAATCCGTCTGCGGTGTTTCGGCAATCCGGCGACGCATCCCCGGG
GTCTGCATGGCCACAGCACCCGCCTTCTAATATTGGCATCCCAGCCCAGTATAAGTACCA
GTACGGAGACTTGCCATTGCCTTGGCAGAACCCATCGCCTATTAACTTCAACTTACCAGT
GAATTTCTCGCATAATCTTCACACTGGACAAAGTTTCTTCACTTACACAGCGTTTCAGCA
TCCCCAAGCCGAACTGCATCAAGAACTAGTTTGTAAATGGACAAAGGCAATGACTGGAGG
CTTCGATGAAACTGGTGCTTATCAGTACGAATCAAAACCAGTTCATCTCCACGTTCCCGG
CGAGCCATGTAACCTAGTTTTCCACAATATGGTTGAACTGGTAGCTCATGTAAGCAGGGA
TCACGTTGGCGGGCCTGAACAAGCGGATCACACTTGCTACTGGGAAAGTTGCTCCCGGAA
AGACAAACCGTTCAAGGCCAAATACAAGTTGATCAACCATATTCGCGTTCACACCGGAGA
GAAACCGTTCTTGTGTCCCTACCCCGGCTGTGGAAAGGTATTCGCTCGCAGCGAGAATTT
GAAGATTCATAAAAGAACCCATACCGGCGAAAAACCGTTTTGTTGCGATTTCAAAGGATG
CAACCGTCGTTTCGCCAACAGTTCGGATCGCAAGAAACATACACATGTACACACCACTGA
CAAGCCGTATCTCTGTAAAATTTTTGGATGCGACAAAAGTTACACACACCCGAGCTCTCT
GCGCAAACACATGAAGTTGCACGAATCCCAAGGTGACATTGTCATCTCATCTGACCTTGA
CGTTCAACAACCTTCAGAGCCGCATTCCCCCGATACTAACAACAACGTCACCCAAAATAT
CAACACTTCATTAAACAGCTACGACGATGAAAAATGCTGTGTCACGCCTTCTAGCCAACA
TCAGCATATTCACGTCATGGAATCGCCGCCTTCGTCATCGGTTTCATCGGCTTCGTCGCC
GGCGTCGGCAAACGCTTGTGAGAATCTAAACCTGGACGCTGGTCACGCAACCTTTCCCTA
TCACGCTTTGAACGACACTGGGTCTCACGAGGTAAAATTTGTCTTGGAGCAAACTAGCGC
AGATTCCGCCGACTCTGGGGCCTTCGTAAGCCCGCAGAATTCCTGGCAGAGCCCTGGGGG
TCTTCCATCGCTTGGGAATCATGGATATTTCATGCCAAGTACCACAAGTTTAGCAAACGA
CTCGCAATATTACTATCACCCTTCCCACCAACCAACACAGCACGTTTACGCTAATCAGCT
TCCCCCCTACAACAGACCACACCCACCAACTTCAATCACCCACACCCCTGAGTTTGTCCC
ATTTTCACACACCCTCGTCACTGCAAGCCCTCAAATTGTCCCCCCAGAATCAGTTTTCTA
AATCTCACCCCACAAGTTTTTCTGCTGTTTCTCTCCGCCATTTTGAGTTTTCATTGTTTT
CGTGCCACACAGTTTTCTGTTGCACTTTCTTGCTGTCCGCAATTCCGCGTGTAGATTTTA
TGTTTGTGCGACGCCGCCTGTCGCAGTTTCGGGGATACTCCCTCGGGTTTTGACACCTTT
TCACTTCACTCTACGATTTGTATGTCGCCTGCGTGAATATTTTTTACCGTATTTTATTCT
TGCACCAATGTGCCAACCGCCCCTTGCTACTCGATGCCTTAATTCGCCAGCTCTATAGCC
GTAATAAGTCGTGCCAAAAATAACGTGCCTTCGTTGCATAACGGTTCATGCAACGTGCCT
ATACTTGGATACACGATACTTGCCTTACTTTAAGTGAATTTGGCAACGGCTTTTTTCTTC
AGGTTCTTTAATTGTTTGGCGTTTTTTTATGTGTGT
| SMART |
Znf_C2H2_type (IPR013087) - T[170-197] 13.0 - T[203-227] 3.4E-4 - T[233-257] 0.8 - T[263-287] 4.3E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[175-202] 11.385 - T[203-232] 16.394 - T[233-262] 12.341 - T[263-292] 11.385 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[184-240] 2.36E-19 - T[227-283] 3.44E-10 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[205-227] 4.9E-5 - T[263-287] 1.1E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[205-227] . - T[235-257] . - T[265-287] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC2_HUMAN | 65.829 % | 272 | 2.06E-85 |
| ZIC3_HUMAN | 61.712 % | 279 | 1.29E-88 |
| ZIC1_HUMAN | 56.855 % | 273 | 1.54E-86 |