- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C4.45.v2.A...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S91.g02970.02.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
S91 [129,843 / 143,452]
Amino acid sequence
Length: 685
>Phmamm.CG.MTP2014.S91.g02970.02.p
MPYQPSFDRRLPGRIKKYMENSPGVDSRSMADDLQKAFKNDYGRRKKTAFRLLVGQVHKD
ILNSGEFANVNKNDNFANKKKKRKISKQQNGSSASCSDDDVRLVEYKDTNLMNKSLSSIY
NKEEISNETPVPSKQPVSFDAAASENGWFIDRGPLKDQEISANKNLKFSNFEDKGLPIDV
NNNDNPNTVTTDTNTLVEMDDINIKLNETKAASLDLKDEKTASAKDINSPKVPIKRKKFK
RDPKLGKKKRKTDGKDAEEDFVPPFLQKQYEMKQSDLTFADFAGNEKSLKELARLLLHMN
HPEIYSTLGVSPPRGVLLHGPPGCGKTLLGNAIAGQLNILLLRLAGPELIGGVSGESERR
VREVFETATQNAPCVLFLDEIDAVAQRRENSSKEMERRIVAQLLTCMDEMNQGANQVMVV
GATNRPEMLDTALRRAGRFDREICLGIPDEQARTQILQVLCKGLKLADDVSYQLIARLTP
GYVGADLLSLCREAAMHAVNRILRVTGPDDVREPNSNKGDILELLRENQPFDDEKLNSLS
IECGDFQLAVRDVQPSAKREGFATIPDVTWDDVGALESIRDELSMAILGPVRNPRAFAAL
GLSRASGVLLAGPPGCGKTMLAKAVANESGINFVSVKGPELLNMYVGESERAVRQCFERA
RNSAPCVIFFDELDSLCPRRSSAEV
Nucleotide sequence
Length: 2,146
>Phmamm.CG.MTP2014.S91.g02970.02.t
CATGCTGCTGCTTGAATTTAAACACAATCTTACTTTACGACACAAGTAAGCAGAATTAAA
CCGTGAAATTGGTGAGTTAAGCATTGAAAAGATGCCTTACCAGCCGAGTTTCGATCGCCG
TCTTCCAGGCCGCATCAAAAAGTACATGGAAAATAGTCCAGGAGTAGACAGCAGATCCAT
GGCTGATGATTTGCAAAAAGCATTCAAAAATGATTATGGAAGAAGAAAGAAAACTGCTTT
TAGGCTTTTGGTTGGGCAAGTGCACAAGGACATTCTTAATTCTGGTGAATTCGCAAATGT
GAACAAAAATGACAATTTTGCGAACAAAAAGAAGAAGAGAAAAATTTCGAAACAACAAAA
TGGTTCCAGTGCATCTTGTTCGGATGATGATGTCAGACTTGTGGAATACAAGGACACAAA
CTTGATGAACAAATCACTATCATCCATTTACAACAAAGAGGAAATATCAAATGAAACACC
AGTGCCTTCCAAACAGCCTGTGTCTTTTGATGCAGCTGCTTCTGAAAATGGTTGGTTTAT
CGACAGAGGACCACTAAAAGACCAAGAAATTTCAGCAAACAAAAACCTAAAATTTTCAAA
TTTTGAAGACAAAGGACTTCCAATTGATGTAAATAATAATGACAACCCAAACACTGTCAC
AACAGACACTAATACATTAGTAGAAATGGACGACATCAACATTAAACTTAATGAAACAAA
AGCAGCAAGTTTAGACCTAAAAGATGAAAAAACTGCTTCAGCAAAAGATATAAATTCACC
TAAAGTTCCAATAAAGAGAAAAAAATTTAAAAGAGATCCCAAACTTGGTAAAAAGAAAAG
AAAAACTGATGGCAAAGATGCTGAAGAAGATTTTGTTCCTCCATTCCTGCAGAAACAGTA
CGAGATGAAACAGTCTGATCTAACATTTGCTGATTTCGCTGGAAATGAAAAATCATTAAA
AGAACTTGCCCGCTTGTTACTGCATATGAATCATCCAGAAATATACAGCACCCTTGGGGT
TTCCCCACCTCGTGGGGTTTTGCTTCACGGACCCCCAGGGTGTGGGAAGACCCTTTTGGG
AAATGCTATAGCTGGGCAGTTGAATATTCTTCTCTTGCGATTGGCTGGTCCCGAGTTGAT
TGGAGGCGTGTCAGGGGAAAGTGAGAGGCGTGTCCGAGAAGTGTTTGAAACTGCGACACA
AAATGCACCTTGTGTTTTGTTCTTAGATGAAATTGATGCTGTGGCGCAACGACGAGAAAA
TTCATCAAAAGAGATGGAGCGTCGTATAGTGGCCCAACTTTTAACGTGTATGGATGAAAT
GAACCAAGGTGCAAATCAGGTTATGGTCGTGGGCGCCACCAACCGGCCAGAAATGCTCGA
CACGGCGTTAAGAAGGGCTGGCAGGTTCGATCGTGAAATATGTCTGGGAATTCCTGACGA
ACAAGCTCGCACACAAATCCTTCAAGTTCTCTGCAAAGGTCTCAAGTTGGCTGATGACGT
CAGCTACCAGCTTATTGCTCGATTAACTCCGGGATATGTTGGAGCCGATTTATTATCTCT
ATGTCGCGAGGCCGCAATGCACGCAGTCAACCGTATCCTAAGAGTCACGGGTCCCGATGA
CGTCAGAGAACCGAATTCAAACAAGGGAGATATTCTTGAACTTTTGCGGGAAAATCAACC
GTTTGATGACGAGAAACTAAACTCTTTGTCAATCGAGTGCGGGGATTTCCAGCTAGCCGT
TCGTGACGTACAACCTTCAGCCAAGCGTGAAGGCTTCGCAACGATACCTGACGTCACGTG
GGATGACGTCGGTGCTCTGGAATCGATTCGAGATGAACTTTCCATGGCGATATTGGGGCC
TGTTAGGAACCCACGGGCCTTTGCGGCTTTAGGACTTTCCCGGGCATCTGGGGTGCTTCT
TGCTGGACCCCCTGGGTGCGGTAAAACTATGCTAGCGAAAGCTGTGGCCAACGAATCAGG
GATAAACTTTGTGTCAGTGAAAGGGCCCGAACTCCTCAACATGTATGTCGGTGAAAGTGA
ACGAGCAGTGAGACAGTGCTTCGAACGAGCTCGCAACTCTGCACCATGTGTGATATTTTT
CGACGAACTCGACTCTCTGTGTCCCAGAAGATCTTCTGCAGAGGTT
| Gene3D |
NLV2_N_sf (IPR038100) - T[3-69] 7.3E-14 |
| Pfam |
NVL2_nucleolin-bd (IPR031996) - T[8-64] 1.6E-14 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[276-515] 1.2E-58 - T[566-680] 3.22E-35 |
| SMART |
AAA+_ATPase (IPR003593) - T[312-449] 6.1E-19 - T[604-684] 0.28 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[316-445] 4.7E-42 - T[608-682] 6.9E-29 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[417-435] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 44.125 % | 350 | 6.74E-109 |
| TERA_HUMAN | 45.694 % | 390 | 4.19E-125 |
| NVL_HUMAN | 48.163 % | 620 | 0 |