- Transcript 'KH2012:KH.C1.928.v1....' >
- Transcript 'KH2012:KH.C3.838.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S960.g13000.01.t
Possible name(s)
ABCB6; ABCB7; ABCB8
Gene model
Location
S960 [42,450 / 46,131]
Amino acid sequence
Length: 732
>Phmamm.CG.MTP2014.S960.g13000.01.p
FHCKMLSDTQFVILQVILPRFLFIVFLHRNNNGIETIQCSLTVITYLFYNKSLCKITNML
SRLHSCHHHLRVCVRPALLVTSHHPIQNYNGSQIVHKQKFTLDSVRYTAMHGSVTGADQN
LGVEPVSSKQILKFMLSYVWPKDNPPVRRRVAFSLSLLVAAKLANVQVPFLFKQVVDTFG
NAGLNLATPENAVFTTGVCLIVAYGTARASAGLFGELRDAVFAKVAQRSIRNIARNLFTH
LHDLDLTFHLSRQTGALSKAIDRGTRGINFVLRALVFNIVPTAFEVTLVSSLLWYKCGGN
FALVTLMTLSTYAAWTLGITAWRTKYRIQMNKADSKIGTIAVDSLINYETVKYFNNEEHE
IKRYDKVLADYEDANLKTNMSLALLNFGQQFIFTSGLTGIMLLAAHGIKEGNLTVGDLVL
VNGLLFQLSVPLNFLGSVYRDIRQAVIDMQSMLSLMSTKQKIARDITALQLVLPKEQASI
SFDNISFAYNPEKNIIDNMSFTVEPGQKVGIVGGSGSGKSTLVRLLYRFYDPDVGKIYLG
GQDIKDLDVNSVRSLIGIVPQETVLFHDTIYHNIAYGDLTASEEQVHEAARMADIHEAIM
RMPLGYKTQVGERGLKLSGGEKQRVAIARAILKNPTFLIYDEATSSLDSITEENILAAVQ
RISKDKTSVFIAHRLSTVMDCDKIFVLDHGRIAEQGTHTQLLANQNSIYFNLWSSQHKAV
LENCEPHENSDN
Nucleotide sequence
Length: 3,581
>Phmamm.CG.MTP2014.S960.g13000.01.t
TTCCACTGTAAAATGCTTTCAGATACACAATTTGTAATTTTGCAAGTGATTTTACCACGC
TTTTTGTTCATTGTATTCTTACATAGAAACAACAATGGTATTGAAACTATTCAGTGCTCA
TTGACTGTAATTACATATTTATTTTATAATAAAAGCTTGTGTAAGATCACAAACATGCTT
TCACGGCTTCATAGCTGCCATCACCACCTGCGTGTTTGTGTGAGACCAGCTTTGTTGGTG
ACATCACATCATCCAATTCAAAATTACAACGGCAGTCAGATTGTCCACAAGCAAAAGTTT
ACCCTTGACAGTGTTCGATATACTGCTATGCATGGATCTGTTACTGGGGCTGATCAGAAT
TTAGGTGTGGAACCTGTCAGCTCAAAACAAATTCTCAAGTTTATGTTGTCGTATGTTTGG
CCTAAGGACAATCCTCCAGTCCGACGGAGAGTTGCATTTTCACTTTCACTTCTAGTGGCT
GCGAAGTTAGCAAATGTCCAAGTGCCTTTTCTGTTCAAACAAGTTGTTGACACATTTGGA
AACGCAGGCCTTAATTTGGCAACTCCCGAAAATGCAGTATTTACCACTGGCGTCTGCCTA
ATTGTTGCTTATGGTACTGCACGTGCAAGTGCAGGTCTATTCGGTGAACTCAGAGATGCT
GTGTTTGCCAAGGTTGCTCAGCGTTCAATTCGAAACATTGCAAGAAATTTATTTACCCAT
TTGCATGACCTTGATTTGACCTTTCATTTATCAAGACAAACTGGGGCTCTTTCAAAAGCT
ATCGATCGTGGAACTAGAGGAATTAACTTTGTTTTACGTGCCCTGGTATTTAACATTGTC
CCCACAGCCTTTGAGGTGACCTTGGTTAGTTCATTACTGTGGTACAAGTGTGGGGGAAAC
TTTGCTTTGGTAACTTTGATGACATTGTCAACTTATGCTGCCTGGACCCTTGGCATTACT
GCATGGCGCACCAAGTATCGAATACAAATGAACAAAGCTGACAGCAAAATAGGAACCATT
GCAGTTGATTCACTAATCAATTATGAAACTGTCAAGTATTTTAACAATGAGGAACATGAA
ATTAAGAGGTATGACAAGGTATTGGCAGATTATGAAGATGCAAACCTCAAAACTAATATG
TCTTTAGCTCTTTTAAACTTTGGACAACAATTTATCTTTACATCAGGTTTAACTGGGATT
ATGCTGCTTGCAGCGCATGGCATTAAAGAAGGAAATCTGACTGTTGGCGATCTTGTTCTT
GTCAATGGGTTGTTGTTTCAGTTGTCAGTCCCATTAAACTTTCTTGGCTCTGTGTATCGT
GACATTAGACAAGCCGTGATCGACATGCAGTCCATGTTAAGTTTGATGAGTACCAAACAA
AAAATTGCAAGAGATATTACTGCACTACAATTGGTTTTGCCAAAAGAACAAGCCTCTATC
TCCTTCGATAACATTTCATTTGCCTACAACCCAGAGAAAAATATCATTGACAACATGAGT
TTTACTGTTGAACCTGGTCAAAAAGTTGGAATTGTTGGAGGCAGTGGAAGCGGAAAGTCA
ACACTTGTAAGGTTGCTGTACAGGTTTTATGACCCAGATGTCGGAAAAATCTACCTTGGT
GGTCAAGATATTAAAGATTTAGATGTCAACAGTGTTCGAAGCTTGATAGGAATTGTCCCA
CAGGAAACAGTTTTATTCCATGACACAATTTATCACAATATTGCTTATGGGGATCTTACT
GCATCTGAAGAACAAGTACATGAGGCGGCCAGGATGGCTGACATCCATGAGGCAATTATG
AGAATGCCACTTGGATATAAAACACAAGTTGGTGAGAGAGGTTTAAAACTGTCTGGCGGA
GAAAAACAAAGAGTTGCCATTGCTCGTGCAATTCTCAAAAACCCAACATTCTTGATTTAT
GATGAGGCGACTTCTTCACTTGACTCAATCACTGAGGAGAACATACTGGCAGCTGTACAG
CGAATTTCAAAAGATAAGACATCTGTGTTTATTGCACATCGCCTTTCAACTGTTATGGAC
TGTGACAAGATATTTGTGCTTGATCATGGACGAATTGCAGAACAGGGAACCCACACACAG
TTACTGGCAAATCAAAACTCAATCTACTTTAACTTGTGGTCCAGTCAGCACAAAGCTGTG
TTGGAAAACTGTGAACCACACGAAAATAGTGACAACTGAAGGTGCCATGACTTTGCTCTC
CTAATGTGTTGCGCTGATATTTGTTAAGTCGTATTATACCTTGAACAATAGTACATTTTT
TGACAGTGCCAACAGATTGTTTGCTGAGTGGCACAAAATAGGAAGCAAATTAAACAAATC
TTTGCTTTCTGCGTATTCCCTAGGAGGATTTTATTTAAAACAATTTTTATTTTGTCTGTA
TCCAAACCTCATTACAAAATGCCCTTCTCAATGTTAGAAACTCTTTTTGTGCTGAATAGG
TGGTTGTTTATTGCTGTTTTTTGTTCTTGTCTGGATTTAAGCAGTAGAATGAGGTTATGG
GGTTGAAATGAGGGGGGGGGGCTAGGTGGTTGTTTATTGCTGTTTTTTCTTGTCTGGATT
TAAGCAGTAGAATGAGGTTATGGGGTTGAAATGATGGTTGCTTTTTTATTATGAAAACCT
GTTCTCTATACATTCTTTTTCTGCAGGGTTATTATAGATGGGCCATGCACTAGAATGGTT
GCCATGTTTGCACTGGTGCAAGTAGTTTTGGAAAGCACTGGTAAAGCCACTCTGTTTTAT
TCACACCCTTCCAGGCGATTAATCTTGCTTTATCATTCGCATGTACCTTTCCAAACCTCA
CAAGCCAATTTTCTGTTTAGCACTCTTTTTACATGTTTAACTTGTTTTTGGAATCTTTCA
ATGCCATACTATACTTGTTCAGCCAAACCGAGTGTACAAAGACCCAATTAAAGCAACTTT
GAAATTGTTGTGTATCTAGCAAGGGTGTTTGAAGATACGCCTATTACTGGATATTGGTTC
GATGTGTGATTACATTTATGATACTTGCCAAGGATGATGTGTAAAGATTAATGTGTTCTG
TTTGAATGCAAACTTCCCTTGTTCATGCACAAAGGCAGAAGGACATTCAATTTTTCTTTT
CTTCTTTATGGCTTGTGATTCTTTTTTGCCTATAAACATTTTTTATTGATCATCAACATT
TATAAAATTAAAGATATTGAAATAAAAAACGTGCTATTACACTATGTAACAAATCCGTAC
AAATGTGGTCTAACCTTCTATGGTGTTTTGGTTAAATTTTTATAGACTAGTCAATGCCAA
AATATAATGATATACAAAAGTACGTACAATTCTTGCTTGATACATGCATGAAAAAAACAT
AATAATCCATGACACATATTATTCAAACAGGATCAATTCAGATTAAAGCTGTTTGACACA
GAAATTGAGCTAAAACTGAACGGAAGTTTTGCTTTTTAACAAGTTTGTCACCCAAACCTG
AAAAGTTGTTTACAAAATAAAGATTTTTACAATACTTGCGTCATTTGACAAGCCCGCCGA
AATCTTATGTTTCGCATTTGGCAATGGATGTGCCACCGAGC
| Gene3D |
ABC1_TM_sf (IPR036640) - T[138-465] 4.1E-131 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[146-456] 1.12E-55 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[152-444] 39.137 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[153-431] 9.2E-37 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[473-716] 9.99E-88 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[480-714] 23.583 |
| Pfam |
ABC_transporter-like (IPR003439) - T[497-645] 4.0E-35 |
| SMART |
AAA+_ATPase (IPR003593) - T[505-685] 6.3E-16 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[617-631] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCB8_HUMAN | 33.509 % | 243 | 6.39E-70 |
| ABCB6_HUMAN | 39.801 % | 437 | 3.26E-142 |
| ABCB7_HUMAN | 57.962 % | 753 | 0 |