- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Cisavi.CG.ENS81.R7.2...' >
- Clone 'cijv049l14' >
- Transcript 'Phmamm.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S960.g13000.02.t
Possible name(s)
ABCB6; ABCB7; ABCB8
Gene model
Location
S960 [42,624 / 44,649]
Amino acid sequence
Length: 674
>Phmamm.CG.MTP2014.S960.g13000.02.p
MLSRLHSCHHHLRVCVRPALLVTSHHPIQNYNGSQIVHKQKFTLDSVRYTAMHGSVTGAD
QNLGVEPVSSKQILKFMLSYVWPKDNPPVRRRVAFSLSLLVAAKLANVQVPFLFKQVVDT
FGNAGLNLATPENAVFTTGVCLIVAYGTARASAGLFGELRDAVFAKVAQRSIRNIARNLF
THLHDLDLTFHLSRQTGALSKAIDRGTRGINFVLRALVFNIVPTAFEVTLVSSLLWYKCG
GNFALVTLMTLSTYAAWTLGITAWRTKYRIQMNKADSKIGTIAVDSLINYETVKYFNNEE
HEIKRYDKVLADYEDANLKTNMSLALLNFGQQFIFTSGLTGIMLLAAHGIKEGNLTVGDL
VLVNGLLFQLSVPLNFLGSVYRDIRQAVIDMQSMLSLMSTKQKIARDITALQLVLPKEQA
SISFDNISFAYNPEKNIIDNMSFTVEPGQKVGIVGGSGSGKSTLVRLLYRFYDPDVGKIY
LGGQDIKDLDVNSVRSLIGIVPQETVLFHDTIYHNIAYGDLTASEEQVHEAARMADIHEA
IMRMPLGYKTQVGERGLKLSGGEKQRVAIARAILKNPTFLIYDEATSSLDSITEENILAA
VQRISKDKTSVFIAHRLSTVMDCDKIFVLDHGRIAEQGTHTQLLANQNSIYFNLWSSQHK
AVLENCEPHENSDN
Nucleotide sequence
Length: 2,025
>Phmamm.CG.MTP2014.S960.g13000.02.t
ATGCTTTCACGGCTTCATAGCTGCCATCACCACCTGCGTGTTTGTGTGAGACCAGCTTTG
TTGGTGACATCACATCATCCAATTCAAAATTACAACGGCAGTCAGATTGTCCACAAGCAA
AAGTTTACCCTTGACAGTGTTCGATATACTGCTATGCATGGATCTGTTACTGGGGCTGAT
CAGAATTTAGGTGTGGAACCTGTCAGCTCAAAACAAATTCTCAAGTTTATGTTGTCGTAT
GTTTGGCCTAAGGACAATCCTCCAGTCCGACGGAGAGTTGCATTTTCACTTTCACTTCTA
GTGGCTGCGAAGTTAGCAAATGTCCAAGTGCCTTTTCTGTTCAAACAAGTTGTTGACACA
TTTGGAAACGCAGGCCTTAATTTGGCAACTCCCGAAAATGCAGTATTTACCACTGGCGTC
TGCCTAATTGTTGCTTATGGTACTGCACGTGCAAGTGCAGGTCTATTCGGTGAACTCAGA
GATGCTGTGTTTGCCAAGGTTGCTCAGCGTTCAATTCGAAACATTGCAAGAAATTTATTT
ACCCATTTGCATGACCTTGATTTGACCTTTCATTTATCAAGACAAACTGGGGCTCTTTCA
AAAGCTATCGATCGTGGAACTAGAGGAATTAACTTTGTTTTACGTGCCCTGGTATTTAAC
ATTGTCCCCACAGCCTTTGAGGTGACCTTGGTTAGTTCATTACTGTGGTACAAGTGTGGG
GGAAACTTTGCTTTGGTAACTTTGATGACATTGTCAACTTATGCTGCCTGGACCCTTGGC
ATTACTGCATGGCGCACCAAGTATCGAATACAAATGAACAAAGCTGACAGCAAAATAGGA
ACCATTGCAGTTGATTCACTAATCAATTATGAAACTGTCAAGTATTTTAACAATGAGGAA
CATGAAATTAAGAGGTATGACAAGGTATTGGCAGATTATGAAGATGCAAACCTCAAAACT
AATATGTCTTTAGCTCTTTTAAACTTTGGACAACAATTTATCTTTACATCAGGTTTAACT
GGGATTATGCTGCTTGCAGCGCATGGCATTAAAGAAGGAAATCTGACTGTTGGCGATCTT
GTTCTTGTCAATGGGTTGTTGTTTCAGTTGTCAGTCCCATTAAACTTTCTTGGCTCTGTG
TATCGTGACATTAGACAAGCCGTGATCGACATGCAGTCCATGTTAAGTTTGATGAGTACC
AAACAAAAAATTGCAAGAGATATTACTGCACTACAATTGGTTTTGCCAAAAGAACAAGCC
TCTATCTCCTTCGATAACATTTCATTTGCCTACAACCCAGAGAAAAATATCATTGACAAC
ATGAGTTTTACTGTTGAACCTGGTCAAAAAGTTGGAATTGTTGGAGGCAGTGGAAGCGGA
AAGTCAACACTTGTAAGGTTGCTGTACAGGTTTTATGACCCAGATGTCGGAAAAATCTAC
CTTGGTGGTCAAGATATTAAAGATTTAGATGTCAACAGTGTTCGAAGCTTGATAGGAATT
GTCCCACAGGAAACAGTTTTATTCCATGACACAATTTATCACAATATTGCTTATGGGGAT
CTTACTGCATCTGAAGAACAAGTACATGAGGCGGCCAGGATGGCTGACATCCATGAGGCA
ATTATGAGAATGCCACTTGGATATAAAACACAAGTTGGTGAGAGAGGTTTAAAACTGTCT
GGCGGAGAAAAACAAAGAGTTGCCATTGCTCGTGCAATTCTCAAAAACCCAACATTCTTG
ATTTATGATGAGGCGACTTCTTCACTTGACTCAATCACTGAGGAGAACATACTGGCAGCT
GTACAGCGAATTTCAAAAGATAAGACATCTGTGTTTATTGCACATCGCCTTTCAACTGTT
ATGGACTGTGACAAGATATTTGTGCTTGATCATGGACGAATTGCAGAACAGGGAACCCAC
ACACAGTTACTGGCAAATCAAAACTCAATCTACTTTAACTTGTGGTCCAGTCAGCACAAA
GCTGTGTTGGAAAACTGTGAACCACACGAAAATAGTGACAACTGA
| Gene3D |
ABC1_TM_sf (IPR036640) - T[80-407] 3.4E-131 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[88-398] 9.29E-56 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[94-386] 39.137 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[95-373] 7.7E-37 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[415-658] 8.43E-88 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[422-656] 23.583 |
| Pfam |
ABC_transporter-like (IPR003439) - T[439-587] 3.4E-35 |
| SMART |
AAA+_ATPase (IPR003593) - T[447-627] 6.3E-16 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[559-573] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCB8_HUMAN | 33.333 % | 243 | 1.25E-70 |
| ABCB6_HUMAN | 39.801 % | 439 | 1.55E-143 |
| ABCB7_HUMAN | 57.962 % | 752 | 0 |