Aniseed - Transcript Card

Clone 'AHC0AAA198YH21' >
Transcript 'Boleac.CG.SB_v3.S52....' >
Transcript 'Phmamm.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S9610.g19463.01.t

Possible name(s)

NLRP12; NLRP7; NOD1

Gene model

Phmamm.CG.MTP2014.S9610.g19463

Location

S9610 [25 / 1,346]

Sequences

Amino acid sequence

Length: 416

>Phmamm.CG.MTP2014.S9610.g19463.01.p
MVDEGNELKGEITIENMFERAKIEAGGFSNHEKSVGIVGQVGVGKSTLTKVIIRKILDKK
VLSNASFVFYIKVDSMDLERETDLFELLFSSLIVEGSLSIDKAEKKELINFILKDPNTVV
IIDGLDEAKTEKLKNSHRPVSPYSKAKPMALLFNILKGNLLANAYKLVTSRNTQFIDASP
EYRPKFVLEILGLAPSEQQKLARCVCGEQFNRVWKILEDNPALLECCVIPVNMLMSLNFL
LGGGGTSDTITLTGVYIAMLNRYIRSKHCSFEKGTDVVKKLCDLAFDGWQKNKSLFSDKD
LEQFKIPLATQQAFVNAAVDSEDGLAIQILQQDKVSYFVHRSWQELLVALKLVLFMPLNE
FKPFLENAFESGDLENVVKFCFGICKDSVFKKARRLSPVAQRENMTCKSGFIFLHV

Nucleotide sequence

Length: 1,251

>Phmamm.CG.MTP2014.S9610.g19463.01.t
ATGGTAGATGAAGGAAATGAACTGAAAGGTGAAATAACAATTGAAAACATGTTTGAAAGA
GCAAAAATTGAAGCGGGGGGCTTTAGCAACCATGAAAAGTCAGTTGGTATTGTTGGCCAA
GTTGGAGTTGGAAAGAGCACATTGACCAAAGTCATTATTCGAAAAATTTTAGACAAGAAA
GTTCTTTCCAATGCTTCTTTTGTGTTTTACATCAAAGTGGACTCCATGGATCTTGAGAGA
GAAACAGATTTATTTGAATTGCTTTTCTCATCACTGATTGTAGAAGGAAGTCTTTCCATA
GACAAAGCAGAAAAAAAGGAGCTGATTAATTTTATCTTAAAAGATCCCAACACAGTAGTA
ATCATTGATGGTCTGGATGAAGCTAAGACTGAAAAATTAAAAAATTCACATAGACCTGTT
TCGCCATATAGCAAAGCAAAACCAATGGCTCTCTTATTCAATATTTTGAAAGGAAATCTG
CTTGCCAATGCTTACAAGCTGGTAACATCAAGAAATACTCAGTTTATTGATGCTTCTCCA
GAATACAGACCAAAATTTGTTTTGGAAATTTTGGGTTTGGCACCGAGTGAACAGCAAAAA
CTTGCTAGGTGTGTATGTGGTGAACAGTTTAACAGAGTTTGGAAAATCCTCGAAGACAAC
CCAGCTTTGTTGGAATGCTGTGTAATACCTGTAAACATGCTTATGTCTCTAAACTTTCTG
TTGGGAGGAGGAGGAACTTCAGATACTATCACACTCACAGGTGTTTACATTGCAATGTTG
AACAGATACATTCGCTCAAAGCATTGCTCGTTTGAAAAAGGCACGGATGTGGTTAAGAAG
CTATGTGACTTGGCATTTGATGGGTGGCAGAAAAACAAGTCTCTGTTTTCAGATAAGGAC
TTAGAGCAGTTTAAGATTCCATTGGCAACACAACAAGCATTTGTCAATGCAGCTGTAGAT
TCAGAGGATGGTCTTGCAATTCAGATTTTGCAACAAGACAAAGTTAGCTACTTTGTTCAT
CGCTCCTGGCAAGAGTTGTTGGTTGCACTCAAACTTGTTCTGTTTATGCCTCTAAATGAG
TTTAAACCTTTCCTTGAAAATGCTTTTGAGTCTGGAGATTTAGAAAATGTTGTAAAGTTT
TGTTTCGGCATTTGCAAAGATAGTGTGTTTAAAAAAGCAAGACGACTTTCTCCTGTAGCA
CAAAGAGAGAACATGACTTGCAAAAGTGGTTTCATCTTTTTGCATGTTTGA

InterProScan

SUPERFAMILY	P-loop_NTPase (IPR027417) - T[30-225] 2.85E-11
SMART	AAA+_ATPase (IPR003593) - T[31-194] 0.007
ProSiteProfiles	NACHT_NTPase (IPR007111) - T[33-171] 13.959
Pfam	NACHT_NTPase (IPR007111) - T[36-205] 1.5E-16

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NOD1_HUMAN	25.313 %	80.9	2.86E-16